.. cerberus documentation master file, created by
   sphinx-quickstart on Tue Oct 25 10:56:32 2022.
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Cerberus: triplet-based transcriptome aggregation and annotation
================================================================

Cerberus is a set of command-line and Python tools to create triplet-based transcriptomes from a variety of input
sources, compute gene triplets for different sets of isoforms, and produce triangular gene-isoform simplex plots.

.. image:: cerberus_logo.png
   :width: 200

**Note:** Cerberus is under active development and the documentation currently
has some missing details. Please feel free to reach out through GitHub issues
if you have any questions.

.. toctree::

   tutorials.rst
   cli_api.rst



Indices and tables
==================

* :ref:`genindex`
* :ref:`modindex`
* :ref:`search`